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module genome_name bin_name contig_name db_name module_name module_class module_category module_subcategory module_definition stepwise_module_completeness pathwise_module_completeness stepwise_module_is_complete pathwise_module_is_complete module_completeness proportion_unique_enzymes_present enzymes_unique_to_module unique_enzymes_context_string enzymes_unique_to_module unique_enzymes_hit_counts enzymes_unique_to_module enzyme_hits_in_module module_definition gene_caller_ids_in_module enzyme_hits_in_module warnings module_completeness Module copy number values in the output If you use the flag --add-copy-number when running anvi-estimate-metabolism, you will see three additional columns describing the estimated copy number of each module: pathwise_copy_number , stepwise_copy_number , and per_step_copy_numbers

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doi: 10.1074/jbc.M602551200 64 ChanvorachotePNimmannitUStehlikCWangLJiangBHOngpipatanakulBet al

These effects are usually temporary as the body adjusts